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  5. Solyc06g030510.4.1

Solyc06g030510.4.1


Description : no hits & (original description: none)


Gene families : OG0000178 (Archaeplastida) Phylogenetic Tree(s): OG0000178_tree ,
OG_05_0000118 (LandPlants) Phylogenetic Tree(s): OG_05_0000118_tree ,
OG_06_0000057 (SeedPlants) Phylogenetic Tree(s): OG_06_0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g030510.4.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00028660 No alias No description available 0.05 Archaeplastida
GSVIVT01017686001 No alias No description available 0.04 Archaeplastida
GSVIVT01027351001 No alias No description available 0.03 Archaeplastida
GSVIVT01028726001 No alias No description available 0.03 Archaeplastida
Solyc03g007510.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090730 Las1 complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 193 344
IPR008906 HATC_C_dom 559 631
No external refs found!