Solyc06g034340.3.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g034340.3.1
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.07	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.09	Archaeplastida
AT1G61110	NAC025, anac025	NAC domain containing protein 25	0.05	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.07	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.04	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.07	Archaeplastida
AT2G18060	VND1, ANAC037	vascular related NAC-domain protein 1	0.03	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.08	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.13	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.11	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.07	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.04	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.07	Archaeplastida
AT5G17260	NAC086, anac086	NAC domain containing protein 86	0.12	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.07	Archaeplastida
AT5G66300	NAC105, VND3, ANAC105	NAC domain containing protein 105	0.02	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01006485001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01007982001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.1	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01028354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01035214001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_24286	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g43560.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g48450.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os11g29430.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_10431997g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_122815g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_167321g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_42101g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp5g01530.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g20920.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c20_18130V3.1	No alias	NAC domain containing protein 2	0.03	Archaeplastida
Solyc01g009860.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc11g008010.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e000149_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.16	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.14	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.14	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e038934_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

No external refs found!

Solyc06g034340.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation