Description : DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea (sp|q41382|rh7_spiol : 444.0)
Gene families : OG0000607 (Archaeplastida) Phylogenetic Tree(s): OG0000607_tree ,
OG_05_0003428 (LandPlants) Phylogenetic Tree(s): OG_05_0003428_tree ,
OG_06_0003705 (SeedPlants) Phylogenetic Tree(s): OG_06_0003705_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g035450.4.1 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G22310 | PMH1, ATRH9 | putative mitochondrial RNA helicase 1 | 0.05 | Archaeplastida | |
Cpa|evm.model.tig00020734.25 | No alias | DEAD-box ATP-dependent RNA helicase 53, mitochondrial... | 0.01 | Archaeplastida | |
Cre02.g118300 | No alias | DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... | 0.02 | Archaeplastida | |
Gb_39948 | No alias | DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... | 0.03 | Archaeplastida | |
LOC_Os09g34910.1 | No alias | DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... | 0.06 | Archaeplastida | |
MA_17924g0010 | No alias | DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... | 0.02 | Archaeplastida | |
Pp3c20_20710V3.1 | No alias | DEAD box RNA helicase (PRH75) | 0.07 | Archaeplastida | |
Smo10677 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
Zm00001e018107_P001 | No alias | RNA helicase (PMH) | 0.02 | Archaeplastida | |
Zm00001e034728_P002 | No alias | DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011545 | DEAD/DEAH_box_helicase_dom | 134 | 310 |
No external refs found! |