1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g036100.3.1

Solyc06g036100.3.1


Description : putative silicon efflux transporter (LSI2)


Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree ,
OG_06_0003853 (SeedPlants) Phylogenetic Tree(s): OG_06_0003853_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g036100.3.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00226220 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.06 Archaeplastida
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.01 Archaeplastida
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.03 Archaeplastida
LOC_Os03g01700.1 No alias putative silicon efflux transporter (LSI2) 0.01 Archaeplastida
Pp3c12_25580V3.1 No alias Divalent ion symporter 0.01 Archaeplastida
Pp3c3_31700V3.1 No alias Divalent ion symporter 0.05 Archaeplastida
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.01 Archaeplastida
Zm00001e004675_P001 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 28 474
No external refs found!