Solyc06g048480.3.1


Description : no hits & (original description: none)


Gene families : OG0002229 (Archaeplastida) Phylogenetic Tree(s): OG0002229_tree ,
OG_05_0002157 (LandPlants) Phylogenetic Tree(s): OG_05_0002157_tree ,
OG_06_0002721 (SeedPlants) Phylogenetic Tree(s): OG_06_0002721_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g048480.3.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT3G54190 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Gb_19308 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g60200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g54090.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g40410.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g31440.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!