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  5. Solyc06g051190.3.1

Solyc06g051190.3.1


Description : Probable RNA-dependent RNA polymerase 3 OS=Arabidopsis thaliana (sp|o82190|rdr3_arath : 754.0)


Gene families : OG0003779 (Archaeplastida) Phylogenetic Tree(s): OG0003779_tree ,
OG_05_0003228 (LandPlants) Phylogenetic Tree(s): OG_05_0003228_tree ,
OG_06_0004082 (SeedPlants) Phylogenetic Tree(s): OG_06_0004082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g051190.3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT2G19910 No alias RNA-dependent RNA polymerase family protein 0.04 Archaeplastida
AT2G19920 No alias RNA-dependent RNA polymerase family protein 0.04 Archaeplastida
GSVIVT01015313001 No alias Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g10130.1 No alias Probable RNA-dependent RNA polymerase 3 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os01g10140.2 No alias Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 266 888
No external refs found!