Solyc06g051840.1.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0015386 (LandPlants) Phylogenetic Tree(s): OG_05_0015386_tree ,
OG_06_0015090 (SeedPlants) Phylogenetic Tree(s): OG_06_0015090_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g051840.1.1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00017p00232330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00023p00044590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00107p00095070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G46768	RAP2.1	related to AP2 1	0.04	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.04	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.02	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.09	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.03	Archaeplastida
Cre14.g620500	No alias	No description available	0.01	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_08642	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.04	Archaeplastida
Gb_08781	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_25978	No alias	Ethylene-responsive transcription factor ABI4...	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09810.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10031781g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_10430231g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
MA_132427g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_66442g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_66742g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_7960347g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9160409g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
Pp3c10_11910V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c16_4710V3.1	No alias	ethylene response factor 7	0.03	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.02	Archaeplastida
Smo38494	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Smo38500	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g078640.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e006139_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	124	173

External Links

No external refs found!

Solyc06g051840.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation