Solyc06g051960.3.1

Description : pectin methylesterase

Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g051960.3.1
Cluster	HCCA: Cluster_268

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00227850	evm_27.TU.AmTr_v1...	Probable pectinesterase/pectinesterase inhibitor 21...	0.02	Archaeplastida
AMTR_s00129p00033080	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01031667001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
LOC_Os01g20980.1	No alias	pectin methylesterase	0.05	Archaeplastida
LOC_Os01g65790.1	No alias	pectin methylesterase	0.03	Archaeplastida
LOC_Os02g54190.1	No alias	pectin methylesterase	0.03	Archaeplastida
LOC_Os07g47830.1	No alias	pectin methylesterase	0.04	Archaeplastida
MA_177599g0010	No alias	pectin methylesterase	0.04	Archaeplastida
MA_96515g0010	No alias	pectin methylesterase	0.02	Archaeplastida
Pp3c4_22420V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Solyc02g014300.2.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc03g083870.4.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc11g005750.2.1	No alias	pectin methylesterase	0.05	Archaeplastida
Zm00001e022184_P001	No alias	pectin methylesterase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005875	microtubule associated complex	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007018	microtubule-based movement	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0015928	fucosidase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
CC	GO:0030286	dynein complex	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	281	578
IPR006501	Pectinesterase_inhib_dom	76	225

External Links

No external refs found!