Solyc06g053380.3.1

Description : Chitinase 5 OS=Oryza sativa subsp. japonica (sp|q7y1z0|chi5_orysj : 294.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0087129 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g053380.3.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00001p00240800	evm_27.TU.AmTr_v1...	Basic endochitinase A OS=Secale cereale	0.02	Archaeplastida
AMTR_s00079p00183520	evm_27.TU.AmTr_v1...	Basic endochitinase OS=Vitis vinifera	0.03	Archaeplastida
AT2G43570	CHI	chitinase, putative	0.03	Archaeplastida
AT2G43580	No alias	Chitinase family protein	0.03	Archaeplastida
AT2G43610	No alias	Chitinase family protein	0.03	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.04	Archaeplastida
AT3G12500	HCHIB, B-CHI,...	basic chitinase	0.03	Archaeplastida
AT3G47540	No alias	Chitinase family protein	0.03	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.02	Archaeplastida
GSVIVT01031685001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01038116001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038126001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.05	Archaeplastida
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_10245	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os02g39330.1	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os03g04060.1	No alias	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os05g04690.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os06g51050.1	No alias	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os06g51060.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_224992g0010	No alias	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_36141g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida	Compare specificities
MA_3814373g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4343642g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4984466g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_853077g0010	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_8960362g0010	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.03	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp2g21810.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Mp4g04430.1	No alias	no description available(sp\|q949h3\|chi1_hevbr : 210.0)	0.02	Archaeplastida
Mp4g20440.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.03	Archaeplastida
Pp3c13_18820V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Pp3c13_4480V3.1	No alias	Chitinase family protein	0.03	Archaeplastida
Pp3c16_17090V3.1	No alias	homolog of carrot EP3-3 chitinase	0.03	Archaeplastida
Pp3c24_15000V3.1	No alias	Chitinase family protein	0.03	Archaeplastida
Pp3c26_2880V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Smo446851	No alias	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
Solyc02g061770.4.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.04	Archaeplastida
Zm00001e025447_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Zm00001e041138_P001	No alias	Endochitinase B (Fragment) OS=Zea mays...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004334	fumarylacetoacetase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Neighborhood
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055071	manganese ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	242	289
IPR000726	Glyco_hydro_19_cat	88	236

External Links

No external refs found!

Solyc06g053380.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation