1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g054310.1.1

Solyc06g054310.1.1


Description : Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana (sp|q6nmr8|faf3_arath : 90.5)


Gene families : OG0003674 (Archaeplastida) Phylogenetic Tree(s): OG0003674_tree ,
OG_05_0002549 (LandPlants) Phylogenetic Tree(s): OG_05_0002549_tree ,
OG_06_0001412 (SeedPlants) Phylogenetic Tree(s): OG_06_0001412_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g054310.1.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00087350 evm_27.TU.AmTr_v1... Protein FAF-like, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G06020 No alias Protein of unknown function (DUF3049) 0.08 Archaeplastida
Gb_36548 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g15530.1 No alias regulatory phosphatase positive regulator (EAR1) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR021410 FAF 125 176
No external refs found!