Description : Met-tRNA positioning component eIF5B of initiator tRNA carrier complex
Gene families : OG0002771 (Archaeplastida) Phylogenetic Tree(s): OG0002771_tree ,
OG_05_0002757 (LandPlants) Phylogenetic Tree(s): OG_05_0002757_tree ,
OG_06_0002708 (SeedPlants) Phylogenetic Tree(s): OG_06_0002708_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g054400.3.1 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G21160 | No alias | eukaryotic translation initiation factor 2 (eIF-2) family protein | 0.04 | Archaeplastida | |
GSVIVT01034895001 | No alias | Protein biosynthesis.translation initiation.eIF5B... | 0.04 | Archaeplastida | |
Gb_28583 | No alias | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.02 | Archaeplastida | |
LOC_Os05g51500.1 | No alias | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.09 | Archaeplastida | |
Pp3c4_28500V3.1 | No alias | eukaryotic translation initiation factor 2 (eIF-2) family protein | 0.03 | Archaeplastida | |
Zm00001e026670_P001 | No alias | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
No external refs found! |