Solyc06g054620.4.1

Description : C3H zinc finger transcription factor

Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0006096 (LandPlants) Phylogenetic Tree(s): OG_05_0006096_tree ,
OG_06_0003875 (SeedPlants) Phylogenetic Tree(s): OG_06_0003875_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g054620.4.1
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01017774001	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.03	Archaeplastida
LOC_Os12g18120.1	No alias	C3H zinc finger transcription factor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	160	184
IPR000571	Znf_CCCH	68	92
IPR000571	Znf_CCCH	356	381
IPR000571	Znf_CCCH	117	138

External Links

No external refs found!