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  5. Solyc06g060480.1.1

Solyc06g060480.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0007008 (SeedPlants) Phylogenetic Tree(s): OG_06_0007008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060480.1.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT3G60580 No alias C2H2-like zinc finger protein 0.01 Archaeplastida
AT4G35610 No alias zinc finger (C2H2 type) family protein 0.04 Archaeplastida
AT4G35700 No alias zinc finger (C2H2 type) family protein 0.04 Archaeplastida
GSVIVT01012197001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
Gb_06483 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_10419 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_33209 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_10426405g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e024331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!