Solyc06g061080.3.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g061080.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00142980	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00119p00040230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT2G02450	ANAC034, LOV1,...	NAC domain containing protein 35	0.05	Archaeplastida
AT2G17040	NAC036, anac036	NAC domain containing protein 36	0.04	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.03	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01019993001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
LOC_Os01g01430.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
LOC_Os06g46270.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c12_18020V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c16_19830V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c3_12890V3.1	No alias	NAC 007	0.03	Archaeplastida
Pp3c5_740V3.1	No alias	NAC domain containing protein 25	0.02	Archaeplastida
Smo67677	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc03g083880.4.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc03g097650.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc06g008360.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e039031_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	133

External Links

No external refs found!

Solyc06g061080.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation