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  5. Solyc06g061160.1.1

Solyc06g061160.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g061160.1.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT4G17810 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_21168 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g36650.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Pp3c17_17640V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e034092_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!