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  5. Solyc06g062600.3.1

Solyc06g062600.3.1


Description : omega-hydroxy fatty acyl dehydrogenase


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0000864 (LandPlants) Phylogenetic Tree(s): OG_05_0000864_tree ,
OG_06_0000685 (SeedPlants) Phylogenetic Tree(s): OG_06_0000685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g062600.3.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00060130 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.04 Archaeplastida
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Archaeplastida
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_38453 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_38455 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g48400.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo404769 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e002156_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004200_P002 No alias omega-hydroxy fatty acyl dehydrogenase 0.04 Archaeplastida
Zm00001e033949_P001 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 434 580
IPR000172 GMC_OxRdtase_N 66 338
No external refs found!