1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g062670.3.1

Solyc06g062670.3.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g062670.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01009680001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01016867001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_41434 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g70870.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.02 Archaeplastida
LOC_Os07g39310.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os08g36390.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10430137g0020 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Mp1g15660.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e003968_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 70 92
No external refs found!