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  5. Solyc06g062880.2.1

Solyc06g062880.2.1


Description : Protein Brevis radix-like 2 OS=Arabidopsis thaliana (sp|q8gyl9|brxl2_arath : 358.0)


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g062880.2.1
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00209000 evm_27.TU.AmTr_v1... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G31880 BRX, NLM9 DZC (Disease resistance/zinc finger/chromosome... 0.05 Archaeplastida
GSVIVT01015117001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01022683001 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g47230.1 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os08g36020.1 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_651632g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_8500V3.1 No alias BREVIS RADIX-like 1 0.03 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027988 BRX_N 22 58
IPR013591 Brevis_radix_dom 314 369
IPR013591 Brevis_radix_dom 138 192
No external refs found!