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  5. Solyc06g063170.3.1

Solyc06g063170.3.1


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g063170.3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00178690 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
AMTR_s00019p00180640 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00183450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.07 Archaeplastida
AMTR_s00019p00184790 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00021p00172130 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
AMTR_s00021p00176450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00055p00227100 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AT2G29100 ATGLR2.9, GLR2.9 glutamate receptor 2.9 0.04 Archaeplastida
AT2G29110 GLR2.8, ATGLR2.8 glutamate receptor 2.8 0.05 Archaeplastida
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.07 Archaeplastida
AT3G07520 GLR1.4, ATGLR1.4 glutamate receptor 1.4 0.03 Archaeplastida
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.03 Archaeplastida
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.04 Archaeplastida
AT5G27100 GLR2.1, ATGLR2.1 glutamate receptor 2.1 0.04 Archaeplastida
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.04 Archaeplastida
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.04 Archaeplastida
GSVIVT01014244001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.06 Archaeplastida
GSVIVT01022297001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01029195001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01030602001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01033137001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.07 Archaeplastida
GSVIVT01033150001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033156001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
Gb_27767 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_28362 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os02g54640.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os07g01310.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os09g31160.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10426811g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10428521g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_391859g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Mp1g01040.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Pp3c12_5540V3.1 No alias glutamate receptor 3.3 0.03 Archaeplastida
Pp3c15_25650V3.1 No alias glutamate receptor 3.3 0.05 Archaeplastida
Smo92810 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.06 Archaeplastida
Solyc06g063190.3.1 No alias ligand-gated cation channel (GLR) 0.06 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Zm00001e009847_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 766 795
IPR001828 ANF_lig-bd_rcpt 10 360
IPR001638 Solute-binding_3/MltF_N 443 765
No external refs found!