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Description : no hits & (original description: none)
Gene families : OG0003049 (Archaeplastida) Phylogenetic Tree(s): OG0003049_tree ,
OG_05_0002155 (LandPlants) Phylogenetic Tree(s): OG_05_0002155_tree ,
OG_06_0003007 (SeedPlants) Phylogenetic Tree(s): OG_06_0003007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g063320.3.1 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G16840 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | Archaeplastida | |
| Gb_11288 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |