Solyc06g064750.1.1

Description : Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum (sp|q6l3z4|r1b12_solde : 352.0)

Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g064750.1.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Solyc05g008690.2.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc05g009760.3.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.04	Archaeplastida
Solyc05g043420.2.1	No alias	Putative late blight resistance protein homolog R1B-17...	0.05	Archaeplastida
Solyc05g044490.3.1	No alias	Late blight resistance protein R1-A OS=Solanum demissum...	0.07	Archaeplastida
Solyc06g008368.1.1	No alias	No annotation	0.07	Archaeplastida
Solyc06g008765.1.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc06g008785.1.1	No alias	Putative late blight resistance protein homolog R1B-17...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	42	273

External Links

No external refs found!