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  5. Solyc06g065100.3.1

Solyc06g065100.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0087203 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g065100.3.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00119p00105590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.03 Archaeplastida
AT5G15310 ATMIXTA, MYB16, ATMYB16 myb domain protein 16 0.04 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028984001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_108542g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_76990g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.01 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e002893_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012681_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e026166_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e038964_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!