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  5. Solyc06g065220.1.1

Solyc06g065220.1.1


Description : no hits & (original description: none)


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0025274 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g065220.1.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00244060 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00008p00251850 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00017p00021670 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00032p00021630 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT2G21200 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT2G21220 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT3G03840 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G09530 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G12410 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT4G36110 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G38825 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G18010 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G18050 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G18060 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G20820 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
GSVIVT01000929001 No alias No description available 0.03 Archaeplastida
GSVIVT01019095001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019096001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019097001 No alias Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019099001 No alias Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019101001 No alias Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024125001 No alias Auxin-induced protein X15 OS=Glycine max 0.02 Archaeplastida
GSVIVT01024126001 No alias Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024127001 No alias Auxin-induced protein 15A OS=Glycine max 0.05 Archaeplastida
GSVIVT01024128001 No alias Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024130001 No alias Auxin-induced protein 10A5 OS=Glycine max 0.04 Archaeplastida
Gb_27169 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g70050.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g42990.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g56680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g02520.1 No alias Auxin-induced protein X15 OS=Glycine max... 0.02 Archaeplastida
LOC_Os08g35110.1 No alias no description available(sp|q29pu2|sau76_arath : 85.5) 0.02 Archaeplastida
MA_19983g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_26797g0010 No alias no description available(sp|q9sl45|sau10_arath : 85.9) 0.03 Archaeplastida
MA_4040668g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_68091g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95364g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g08420.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c4_13150V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Solyc01g110555.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g110770.2.1 No alias Auxin-induced protein 15A OS=Glycine max... 0.03 Archaeplastida
Solyc01g110790.3.1 No alias Auxin-induced protein 15A OS=Glycine max... 0.04 Archaeplastida
Solyc01g110903.1.1 No alias Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g042470.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g079150.1.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g054760.1.1 No alias Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g009290.1.1 No alias no description available(sp|q29pu2|sau76_arath : 103.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 15 83
No external refs found!