Solyc06g065410.3.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g065410.3.1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00266320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00011p00251570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.05	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.02	Archaeplastida
AT1G33060	ANAC014, NAC014	NAC 014	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.02	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.03	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.02	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	Archaeplastida
AT5G53950	ATCUC2, ANAC098, CUC2	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.02	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020384001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01020389001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01023123001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01034485001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01036682001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_37440	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os02g36880.2	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os02g41450.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os04g45340.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
LOC_Os06g01230.1	No alias	transcription factor (NAC)	0.08	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_32763g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_80232g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_98483g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
Mp4g11910.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Mp5g01530.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.04	Archaeplastida
Pp3c20_18130V3.1	No alias	NAC domain containing protein 2	0.04	Archaeplastida
Pp3c3_25610V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c6_1310V3.1	No alias	NAC domain containing protein 70	0.02	Archaeplastida
Smo147012	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g077110.4.1	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e004141_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007603_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e011934_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e023635_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e031694_P001	No alias	No annotation	0.05	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e041236_P002	No alias	transcription factor (NAC)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

No external refs found!

Solyc06g065410.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation