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  5. Solyc06g065800.3.1

Solyc06g065800.3.1


Description : no hits & (original description: none)


Gene families : OG0000745 (Archaeplastida) Phylogenetic Tree(s): OG0000745_tree ,
OG_05_0000781 (LandPlants) Phylogenetic Tree(s): OG_05_0000781_tree ,
OG_06_0003996 (SeedPlants) Phylogenetic Tree(s): OG_06_0003996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g065800.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00104470 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
AT1G15870 No alias Mitochondrial glycoprotein family protein 0.02 Archaeplastida
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.08 Archaeplastida
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.09 Archaeplastida
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.04 Archaeplastida
Cre04.g225600 No alias No description available 0.02 Archaeplastida
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 Archaeplastida
Gb_27592 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 Archaeplastida
LOC_Os06g22070.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
LOC_Os08g34130.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427007g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 Archaeplastida
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.05 Archaeplastida
Mp1g21440.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_23320V3.1 No alias Mitochondrial glycoprotein family protein 0.02 Archaeplastida
Zm00001e004097_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e016932_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.05 Archaeplastida
Zm00001e025796_P002 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 Archaeplastida
Zm00001e036951_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003428 MAM33 77 234
No external refs found!