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  5. Solyc06g066380.1.1

Solyc06g066380.1.1


Description : Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana (sp|q9fjy7|pp449_arath : 306.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0017865 (LandPlants) Phylogenetic Tree(s): OG_05_0017865_tree ,
OG_06_0017415 (SeedPlants) Phylogenetic Tree(s): OG_06_0017415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g066380.1.1

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01027001001 No alias Protein modification.phosphorylation.TKL kinase... 0.01 Archaeplastida
LOC_Os03g13830.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
LOC_Os03g50400.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os11g01860.1 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.07 Archaeplastida
Smo11486 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 Archaeplastida
Smo442088 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 Archaeplastida
Solyc02g065410.3.1 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.09 Archaeplastida
Solyc03g114660.1.1 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.08 Archaeplastida
Solyc07g009220.2.1 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.11 Archaeplastida
Solyc07g062820.1.1 No alias RNA editing factor (SEL1/PDM1) 0.05 Archaeplastida
Zm00001e039180_P001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 304
IPR002885 Pentatricopeptide_repeat 156 181
IPR002885 Pentatricopeptide_repeat 331 356
IPR002885 Pentatricopeptide_repeat 124 152
No external refs found!