1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00026p00213790

AMTR_s00026p00213790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.114

Description : Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase


Gene families : OG0000045 (Archaeplastida) Phylogenetic Tree(s): OG0000045_tree ,
OG_05_0000041 (LandPlants) Phylogenetic Tree(s): OG_05_0000041_tree ,
OG_06_0000716 (SeedPlants) Phylogenetic Tree(s): OG_06_0000716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00026p00213790
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00263150 evm_27.TU.AmTr_v1... Probable xyloglucan endotransglucosylase/hydrolase... 0.04 Archaeplastida
AMTR_s00026p00209160 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
AMTR_s00026p00210850 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.09 Archaeplastida
AMTR_s00026p00215600 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.07 Archaeplastida
AMTR_s00026p00217290 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.08 Archaeplastida
AMTR_s00065p00199270 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000757 GH16 5 153
No external refs found!