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  5. Solyc06g066853.1.1

Solyc06g066853.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 120.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g066853.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc01g014963.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc01g065625.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g106575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Solyc01g150141.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc02g024045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Solyc02g030461.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc02g062045.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g044024.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc03g083485.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g064805.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc04g150127.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g011883.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Solyc05g013617.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Solyc05g015493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.12 Archaeplastida
Solyc07g041755.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.01 Archaeplastida
Solyc09g015065.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.25 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 207 288
IPR029472 UBN2_3 37 82
No external refs found!