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  5. AMTR_s00026p00224150

AMTR_s00026p00224150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.121

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00026p00224150
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00260860 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00014p00240860 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00034p00218780 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00035p00152670 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00055p00086220 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00076p00121030 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00084p00075840 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00113p00028110 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00118p00111210 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00144p00028410 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00157p00019390 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!