Solyc06g069760.3.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0001523 (SeedPlants) Phylogenetic Tree(s): OG_06_0001523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g069760.3.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00119p00099150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AT1G26790 No alias Dof-type zinc finger DNA-binding family protein 0.1 Archaeplastida
AT3G47500 CDF3 cycling DOF factor 3 0.08 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.01 Archaeplastida
AT5G62430 CDF1 cycling DOF factor 1 0.08 Archaeplastida
GSVIVT01011433001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.01 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019969001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.13 Archaeplastida
GSVIVT01029943001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.12 Archaeplastida
Gb_07177 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.01 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g48570.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_175298g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_2430g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7537g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c13_21190V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c3_26370V3.1 No alias cycling DOF factor 3 0.04 Archaeplastida
Solyc02g088070.3.1 No alias transcription factor (DOF) 0.12 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e000526_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e017319_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 142 198
No external refs found!