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  5. Solyc06g070950.2.1

Solyc06g070950.2.1


Description : subfamily ABCA transporter


Gene families : OG0000865 (Archaeplastida) Phylogenetic Tree(s): OG0000865_tree ,
OG_05_0001209 (LandPlants) Phylogenetic Tree(s): OG_05_0001209_tree ,
OG_06_0000923 (SeedPlants) Phylogenetic Tree(s): OG_06_0000923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g070950.2.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT5G61740 ATATH14, ATH14 ABC2 homolog 14 0.03 Archaeplastida
Cpa|evm.model.tig00000057.67 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre14.g618400 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre17.g721000 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Mp5g00540.1 No alias subfamily ABCA transporter 0.03 Archaeplastida
Pp3c12_20160V3.1 No alias ABC2 homolog 7 0.02 Archaeplastida
Smo171117 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo268954 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc03g113040.4.1 No alias subfamily ABCA transporter 0.05 Archaeplastida
Zm00001e014489_P004 No alias subfamily ABCA transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 594 738
No external refs found!