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  5. Solyc06g070980.3.1

Solyc06g070980.3.1


Description : ubiquitin-conjugating E2 protein


Gene families : OG0000900 (Archaeplastida) Phylogenetic Tree(s): OG0000900_tree ,
OG_05_0002020 (LandPlants) Phylogenetic Tree(s): OG_05_0002020_tree ,
OG_06_0002099 (SeedPlants) Phylogenetic Tree(s): OG_06_0002099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g070980.3.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT1G14400 ATUBC1, UBC1 ubiquitin carrier protein 1 0.03 Archaeplastida
AT2G02760 ATUBC2, UBC2 ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Cpa|evm.model.tig00000737.3 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Cre06.g294850 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01008045001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01020056001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
GSVIVT01022467001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.1 Archaeplastida
Gb_26842 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
LOC_Os03g57790.1 No alias ubiquitin-conjugating E2 protein 0.07 Archaeplastida
LOC_Os07g07240.1 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
Mp2g13120.1 No alias Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum... 0.07 Archaeplastida
Mp8g17960.1 No alias ubiquitin-conjugating E2 protein 0.06 Archaeplastida
Pp3c12_9550V3.1 No alias ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Pp3c12_9600V3.1 No alias ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Zm00001e011475_P001 No alias ubiquitin-conjugating E2 protein 0.04 Archaeplastida
Zm00001e029917_P003 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!