Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g071020.3.1 | |
Cluster | HCCA: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00123190 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.09 | Archaeplastida | |
AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
AT1G14420 | AT59 | Pectate lyase family protein | 0.08 | Archaeplastida | |
AT2G02720 | No alias | Pectate lyase family protein | 0.07 | Archaeplastida | |
AT3G01270 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
AT5G09280 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT5G15110 | No alias | Pectate lyase family protein | 0.05 | Archaeplastida | |
GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | Archaeplastida | |
GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | Archaeplastida | |
Gb_19802 | No alias | pectate lyase | 0.04 | Archaeplastida | |
LOC_Os02g12300.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
LOC_Os04g05050.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
LOC_Os06g05209.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
LOC_Os06g05260.1 | No alias | pectate lyase | 0.07 | Archaeplastida | |
LOC_Os06g38510.2 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10437227g0030 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Mp8g00770.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Mp8g10190.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c22_19760V3.1 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
Pp3c22_19780V3.1 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
Solyc03g058910.3.1 | No alias | pectate lyase | 0.07 | Archaeplastida | |
Solyc05g007080.4.1 | No alias | pectate lyase | 0.09 | Archaeplastida | |
Zm00001e024959_P001 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Zm00001e037311_P001 | No alias | pectate lyase | 0.12 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030570 | pectate lyase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
No external refs found! |