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  5. Solyc06g071520.1.1

Solyc06g071520.1.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071520.1.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00224180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 Archaeplastida
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.03 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 Archaeplastida
Cpa|evm.model.tig00000448.26 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g28280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g29614.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10428459g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_37851g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c14_14030V3.1 No alias Homeodomain-like protein 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g112890.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g014470.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g071690.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 155 201
IPR001005 SANT/Myb 210 249
No external refs found!