1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g071770.4.1

Solyc06g071770.4.1


Description : NBR1 autophagosome autophagic adapter protein


Gene families : OG0002260 (Archaeplastida) Phylogenetic Tree(s): OG0002260_tree ,
OG_05_0002463 (LandPlants) Phylogenetic Tree(s): OG_05_0002463_tree ,
OG_06_0002833 (SeedPlants) Phylogenetic Tree(s): OG_06_0002833_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071770.4.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.133 No alias No description available 0.02 Archaeplastida
Zm00001e014993_P002 No alias NBR1 autophagosome autophagic adapter protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032350 N_BRCA1_central 434 535
IPR000270 PB1_dom 5 76
IPR000433 Znf_ZZ 348 383
No external refs found!