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  5. Solyc06g071840.3.1

Solyc06g071840.3.1


Description : Probable pectate lyase 22 OS=Arabidopsis thaliana (sp|q93z25|ply22_arath : 506.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 431.2)


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0087260 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071840.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.14 Archaeplastida
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01007582001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Gb_02248 No alias pectate lyase 0.04 Archaeplastida
Gb_19802 No alias pectate lyase 0.03 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.01 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.03 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.05 Archaeplastida
MA_10353668g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.02 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.06 Archaeplastida
MA_10437227g0030 No alias pectate lyase 0.02 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.04 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.05 Archaeplastida
MA_476625g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.02 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.07 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.03 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Mp3g01000.1 No alias pectate lyase 0.07 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.02 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.02 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Solyc01g010740.4.1 No alias pectate lyase 0.06 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.01 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g008380.3.1 No alias pectate lyase 0.04 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.04 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.06 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.02 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 205 276
No external refs found!