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  5. Solyc06g072040.1.1

Solyc06g072040.1.1


Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0000443 (Archaeplastida) Phylogenetic Tree(s): OG0000443_tree ,
OG_05_0000515 (LandPlants) Phylogenetic Tree(s): OG_05_0000515_tree ,
OG_06_0000553 (SeedPlants) Phylogenetic Tree(s): OG_06_0000553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072040.1.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
LOC_Os02g07450.2 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida
LOC_Os09g30310.1 No alias component NF-YC of NF-Y transcription factor complex 0.04 Archaeplastida
MA_33970g0010 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e024345_P001 No alias component NF-YC of NF-Y transcription factor complex 0.08 Archaeplastida
Zm00001e034481_P001 No alias component NF-YC of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e037748_P001 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 66 129
No external refs found!