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  5. Solyc06g072280.3.1

Solyc06g072280.3.1


Description : component Sm-E of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0003300 (Archaeplastida) Phylogenetic Tree(s): OG0003300_tree ,
OG_05_0003792 (LandPlants) Phylogenetic Tree(s): OG_05_0003792_tree ,
OG_06_0004547 (SeedPlants) Phylogenetic Tree(s): OG_06_0004547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072280.3.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008301001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
LOC_Os02g03440.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
Pp3c14_15210V3.1 No alias Small nuclear ribonucleoprotein family protein 0.01 Archaeplastida
Zm00001e016468_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 20 83
No external refs found!