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  5. Solyc06g072350.3.1

Solyc06g072350.3.1


Description : no hits & (original description: none)


Gene families : OG0007139 (Archaeplastida) Phylogenetic Tree(s): OG0007139_tree ,
OG_05_0005119 (LandPlants) Phylogenetic Tree(s): OG_05_0005119_tree ,
OG_06_0003256 (SeedPlants) Phylogenetic Tree(s): OG_06_0003256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072350.3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT2G39518 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT2G39530 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
LOC_Os11g34730.1 No alias CASP-like protein 4D1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc04g011467.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g011490.4.1 No alias CASP-like protein PIMP1 OS=Capsicum annuum... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 5 112
No external refs found!