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  5. Solyc06g072890.3.1

Solyc06g072890.3.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0001039 (SeedPlants) Phylogenetic Tree(s): OG_06_0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072890.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.02 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.03 Archaeplastida
AT3G03660 WOX11 WUSCHEL related homeobox 11 0.01 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 Archaeplastida
AT5G59340 WOX2 WUSCHEL related homeobox 2 0.06 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.01 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.08 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.05 Archaeplastida
Gb_29958 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.01 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.01 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.01 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_10234279g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.01 Archaeplastida
MA_33318g0010 No alias transcription factor (WOX) 0.05 Archaeplastida
MA_42637g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_747816g0010 No alias transcription factor (WOX) 0.01 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.01 Archaeplastida
MA_921642g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc03g118770.4.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e001527_P001 No alias transcription factor (WOX) 0.01 Archaeplastida
Zm00001e006644_P002 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.01 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.01 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 37 97
No external refs found!