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  5. Solyc06g073180.3.1

Solyc06g073180.3.1


Description : transcription factor (BBX-DBB)


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0000694 (LandPlants) Phylogenetic Tree(s): OG_05_0000694_tree ,
OG_06_0006215 (SeedPlants) Phylogenetic Tree(s): OG_06_0006215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g073180.3.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00255780 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
AT1G06040 STO B-box zinc finger family protein 0.13 Archaeplastida
AT2G21320 No alias B-box zinc finger family protein 0.17 Archaeplastida
AT2G31380 STH salt tolerance homologue 0.09 Archaeplastida
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
LOC_Os09g35880.1 No alias transcription factor (BBX-DBB) 0.1 Archaeplastida
Pp3c17_14230V3.1 No alias light-regulated zinc finger protein 1 0.04 Archaeplastida
Pp3c7_5280V3.1 No alias B-box type zinc finger family protein 0.1 Archaeplastida
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Smo271535 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Zm00001e010221_P001 No alias transcription factor (BBX-DBB) 0.06 Archaeplastida
Zm00001e034791_P001 No alias transcription factor (BBX-DBB) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 53 95
No external refs found!