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  5. Solyc06g073750.4.1

Solyc06g073750.4.1


Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 213.1) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia (sp|a5jtq3|xyl2_medsv : 145.0)


Gene families : OG0000439 (Archaeplastida) Phylogenetic Tree(s): OG0000439_tree ,
OG_05_0000476 (LandPlants) Phylogenetic Tree(s): OG_05_0000476_tree ,
OG_06_0000400 (SeedPlants) Phylogenetic Tree(s): OG_06_0000400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g073750.4.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00104p00072030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s01542p00001140 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AT5G04885 No alias Glycosyl hydrolase family protein 0.02 Archaeplastida
GSVIVT01023452001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 Archaeplastida
GSVIVT01023455001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
GSVIVT01024793001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
Gb_34627 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
LOC_Os02g03870.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
LOC_Os03g53860.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 Archaeplastida
MA_10429527g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
MA_377488g0010 No alias No annotation 0.02 Archaeplastida
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
Pp3c4_23400V3.1 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
Pp3c6_240V3.1 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 412 621
IPR001764 Glyco_hydro_3_N 47 375
No external refs found!