Solyc06g075140.3.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g075140.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.02 Archaeplastida
GSVIVT01018833001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
LOC_Os04g45650.2 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os05g44400.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e039468_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 169 203
No external refs found!