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Description : alpha-class expansin
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g076220.3.1 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00270650 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| AMTR_s00010p00264980 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| AMTR_s00119p00058870 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AT1G20190 | ATEXPA11, ATHEXP... | expansin 11 | 0.02 | Archaeplastida | |
| AT2G28950 | EXPA6, ATEXP6,... | expansin A6 | 0.03 | Archaeplastida | |
| GSVIVT01029411001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01032681001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Gb_01048 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_09118 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Gb_20678 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Gb_33854 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os02g51040.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| LOC_Os03g06010.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os05g19600.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os12g36040.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_10425823g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_130258g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_134592g0010 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| MA_36587g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_37884g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_45587g0020 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_474624g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_4979g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_70880g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_7218g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_792493g0010 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| MA_91602g0010 | No alias | Expansin-A2 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Mp1g24230.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp2g18610.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp5g20420.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp8g18860.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Pp3c12_4560V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c14_18030V3.1 | No alias | expansin A14 | 0.01 | Archaeplastida | |
| Pp3c18_19660V3.1 | No alias | expansin A9 | 0.05 | Archaeplastida | |
| Pp3c18_19720V3.1 | No alias | expansin A1 | 0.04 | Archaeplastida | |
| Pp3c20_5780V3.1 | No alias | expansin A15 | 0.03 | Archaeplastida | |
| Pp3c21_1850V3.1 | No alias | expansin A1 | 0.05 | Archaeplastida | |
| Pp3c21_1940V3.1 | No alias | expansin A9 | 0.03 | Archaeplastida | |
| Pp3c22_760V3.1 | No alias | expansin A1 | 0.04 | Archaeplastida | |
| Pp3c8_13450V3.1 | No alias | expansin A1 | 0.03 | Archaeplastida | |
| Pp3c8_14900V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Smo231226 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Smo419575 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| Smo75237 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Smo90332 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo90935 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Smo91129 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.09 | Archaeplastida | |
| Solyc01g010890.4.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Solyc02g088100.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc04g081870.4.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Solyc06g005560.4.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Solyc09g010860.4.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Zm00001e038997_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |