AT1G43600

Description : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Gene families : OG0000720 (Archaeplastida) Phylogenetic Tree(s): OG0000720_tree ,
OG_05_0010969 (LandPlants) Phylogenetic Tree(s): OG_05_0010969_tree ,
OG_06_0010952 (SeedPlants) Phylogenetic Tree(s): OG_06_0010952_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G43600
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AT2G04930	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.07	Archaeplastida
AT3G17550	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.03	Archaeplastida
AT3G19600	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.03	Archaeplastida
AT5G54210	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005759	mitochondrial matrix	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004274	FCP1_dom	20	173

External Links

No external refs found!