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  5. Solyc06g076930.2.1

Solyc06g076930.2.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0010475 (SeedPlants) Phylogenetic Tree(s): OG_06_0010475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g076930.2.1
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00224800 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00013p00097650 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00122p00085720 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00122p00121250 evm_27.TU.AmTr_v1... Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza 0.03 Archaeplastida
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Archaeplastida
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Archaeplastida
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.04 Archaeplastida
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 Archaeplastida
Cre09.g395750 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre12.g540650 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre16.g655450 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01033804001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_05443 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10426781g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10427561g0020 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.03 Archaeplastida
MA_12965g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_249533g0010 No alias ABC transporter G family member 31 OS=Arabidopsis... 0.04 Archaeplastida
MA_300423g0010 No alias ABC transporter G family member 36 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c18_12400V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.03 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Smo82705 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e006460_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.06 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1151 1363
IPR013525 ABC_2_trans 506 718
IPR003439 ABC_transporter-like 854 1005
IPR013581 PDR_assoc 723 786
IPR003439 ABC_transporter-like 169 352
IPR029481 ABC_trans_N 83 143
No external refs found!