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  5. Solyc06g082040.2.1

Solyc06g082040.2.1


Description : no hits & (original description: none)


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000567 (LandPlants) Phylogenetic Tree(s): OG_05_0000567_tree ,
OG_06_0004205 (SeedPlants) Phylogenetic Tree(s): OG_06_0004205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082040.2.1
Cluster HCCA: Cluster_579

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00159900 evm_27.TU.AmTr_v1... Increased DNA methylation 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
AT2G36720 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
AT3G53680 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.01 Archaeplastida
AT5G58610 No alias PHD finger transcription factor, putative 0.01 Archaeplastida
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
Gb_10088 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 Archaeplastida
LOC_Os03g53630.1 No alias PHD finger transcription factor 0.01 Archaeplastida
LOC_Os04g35430.1 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.01 Archaeplastida
LOC_Os07g07690.1 No alias PHD finger transcription factor 0.03 Archaeplastida
LOC_Os07g49290.1 No alias PHD finger transcription factor 0.01 Archaeplastida
Pp3c10_7690V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Pp3c7_8630V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Solyc03g071550.3.1 No alias PHD finger transcription factor 0.1 Archaeplastida
Solyc09g031580.3.1 No alias PHD finger transcription factor 0.04 Archaeplastida
Solyc09g065340.3.1 No alias PHD finger transcription factor 0.01 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc10g084650.3.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Zm00001e012046_P003 No alias PHD finger transcription factor 0.02 Archaeplastida
Zm00001e013368_P001 No alias PHD finger transcription factor 0.01 Archaeplastida
Zm00001e036733_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 28 104
No external refs found!