Solyc06g082200.4.1


Description : no hits & (original description: none)


Gene families : OG0001621 (Archaeplastida) Phylogenetic Tree(s): OG0001621_tree ,
OG_05_0005497 (LandPlants) Phylogenetic Tree(s): OG_05_0005497_tree ,
OG_06_0007972 (SeedPlants) Phylogenetic Tree(s): OG_06_0007972_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082200.4.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024678001 No alias No description available 0.04 Archaeplastida
Gb_39184 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430166g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_152426g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_771522g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_20280V3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026147 Rab3-GAP_cat_su 559 720
No external refs found!