Description : transcription factor (LAV-VAL)

Gene families : OG0002264 (Archaeplastida) Phylogenetic Tree(s): OG0002264_tree ,
OG_05_0002646 (LandPlants) Phylogenetic Tree(s): OG_05_0002646_tree ,
OG_06_0002238 (SeedPlants) Phylogenetic Tree(s): OG_06_0002238_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc06g082520.3.1
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
MA_10434655g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95218g0010 No alias B3 domain-containing protein Os07g0679700 OS=Oryza... 0.03 Archaeplastida
Smo88108 No alias RNA biosynthesis.transcriptional activation.B3... 0.01 Archaeplastida
Zm00001e010557_P001 No alias transcription factor (LAV-VAL) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 317 416
IPR011124 Znf_CW 546 588
No external refs found!