Solyc06g082660.4.1

Description : regulatory component RPT3 of 26S proteasome

Gene families : OG0002892 (Archaeplastida) Phylogenetic Tree(s): OG0002892_tree ,
OG_05_0002758 (LandPlants) Phylogenetic Tree(s): OG_05_0002758_tree ,
OG_06_0004068 (SeedPlants) Phylogenetic Tree(s): OG_06_0004068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g082660.4.1
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00161980	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.regulatory...	0.03	Archaeplastida
AT5G58290	RPT3	regulatory particle triple-A ATPase 3	0.03	Archaeplastida
Cre09.g402450	No alias	Protein degradation.26S proteasome.regulatory...	0.03	Archaeplastida
LOC_Os02g21970.1	No alias	regulatory component RPT3 of 26S proteasome	0.06	Archaeplastida
Mp8g10830.1	No alias	regulatory component RPT3 of 26S proteasome	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032501	Prot_ATP_ID_OB	85	140
IPR003959	ATPase_AAA_core	198	331

External Links

No external refs found!